Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhgb8A0A140LI48 BC037039-201ENSMUST00000192003 2205 ntBASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhgb8A0A140LI48 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhgb8A0A140LI48 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms