Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Atg4a-psA0A0G2JFS9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm13036-201ENSMUST00000117799 748 ntBASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm4899-201ENSMUST00000178708 719 ntBASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.7■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm12350-201ENSMUST00000121208 462 ntBASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm7461-201ENSMUST00000058918 827 ntBASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mir5126-201ENSMUST00000175513 77 ntBASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms