Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rpph1-201ENSMUST00000175096 319 ntBASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-42A0A0A6YY38 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm13365-201ENSMUST00000121188 973 ntBASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rprl2-201ENSMUST00000157150 290 ntBASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm20553-201ENSMUST00000204205 844 ntBASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-42A0A0A6YY38 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm11745-201ENSMUST00000121669 448 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm10154-201ENSMUST00000084445 354 ntBASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-42A0A0A6YY38 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms