Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 AA414768-201ENSMUST00000121924 1257 ntBASIC12.66□□□□□ -0.38
Trav18A0A075B656 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.66□□□□□ -0.38
Trav18A0A075B656 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.65□□□□□ -0.38
Trav18A0A075B656 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.65□□□□□ -0.38
Trav18A0A075B656 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav18A0A075B656 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav18A0A075B656 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav18A0A075B656 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav18A0A075B656 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm8825-201ENSMUST00000182565 998 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm4518-201ENSMUST00000182638 718 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms