Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11□□□□□ -0.65
Trav13-1A0A075B644 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-1A0A075B644 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Mir5126-201ENSMUST00000175513 77 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Gm6089-201ENSMUST00000197666 938 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 AW822252-206ENSMUST00000208904 237 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Gm18622-201ENSMUST00000219361 595 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Prob1-201ENSMUST00000097619 3021 ntBASIC10.98□□□□□ -0.65
Trav13-1A0A075B644 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Gm7222-201ENSMUST00000117512 906 ntBASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-1A0A075B644 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms