Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-1A0A075B5Z8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-1A0A075B5Z8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-1A0A075B5Z8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-1A0A075B5Z8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-1A0A075B5Z8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms