Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm5745-201ENSMUST00000183748 313 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm36967-201ENSMUST00000193814 266 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm44492-201ENSMUST00000197012 141 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm43438-201ENSMUST00000198133 379 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm45167-201ENSMUST00000208007 322 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.56□□□□□ -0.24
Nubp1Q9R060 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Gm8344-201ENSMUST00000119813 856 ntBASIC13.56□□□□□ -0.24
Nubp1Q9R060 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.56□□□□□ -0.24
Nubp1Q9R060 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nubp1Q9R060 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nubp1Q9R060 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm13216-201ENSMUST00000117145 591 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm8825-201ENSMUST00000182565 998 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm4518-201ENSMUST00000182638 718 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms