Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Gm12350-201ENSMUST00000121208 462 ntBASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Mir5126-201ENSMUST00000175513 77 ntBASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Gm6089-201ENSMUST00000197666 938 ntBASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcf1Q9QZM3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gm15173-201ENSMUST00000122049 433 ntBASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcf1Q9QZM3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcf1Q9QZM3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcf1Q9QZM3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcf1Q9QZM3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clcf1Q9QZM3 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm8825-201ENSMUST00000182565 998 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm4518-201ENSMUST00000182638 718 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm18622-201ENSMUST00000219361 595 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcf1Q9QZM3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 478.9 ms