Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Psmb5-202ENSMUST00000227257 622 ntBASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Phtf1Q9QZ09 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Gm27300-201ENSMUST00000184085 97 ntBASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Gm27335-201ENSMUST00000184758 97 ntBASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Phtf1Q9QZ09 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Gm5364-201ENSMUST00000216789 889 ntBASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Phtf1Q9QZ09 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Gm6443-201ENSMUST00000203599 874 ntBASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.91■□□□□ 0.3
Phtf1Q9QZ09 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms