Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh5Q9QUM7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Msh5Q9QUM7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Msh5Q9QUM7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.89■□□□□ 0.13
Msh5Q9QUM7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 AC139323.1-201ENSMUST00000223370 1040 ntBASIC15.89■□□□□ 0.13
Msh5Q9QUM7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh5Q9QUM7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Gm38188-201ENSMUST00000192879 856 ntBASIC15.88■□□□□ 0.13
Msh5Q9QUM7 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Gm10478-201ENSMUST00000084451 396 ntBASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh5Q9QUM7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gm29288-201ENSMUST00000191582 901 ntBASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Gm36991-201ENSMUST00000191800 648 ntBASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh5Q9QUM7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.86■□□□□ 0.13
Msh5Q9QUM7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms