Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Gm6443-201ENSMUST00000203599 874 ntBASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Gm13597-201ENSMUST00000121239 375 ntBASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx5Q9JL61 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Asic1-205ENSMUST00000228185 1818 ntBASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Rfx5Q9JL61 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx5Q9JL61 BC037039-201ENSMUST00000192003 2205 ntBASIC16.27■□□□□ 0.19
Rfx5Q9JL61 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx5Q9JL61 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx5Q9JL61 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx5Q9JL61 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx5Q9JL61 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.26■□□□□ 0.19
Rfx5Q9JL61 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rfx5Q9JL61 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx5Q9JL61 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms