Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cfap53Q9D439 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Gm8097-201ENSMUST00000117903 829 ntBASIC16.97■□□□□ 0.31
Cfap53Q9D439 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.97■□□□□ 0.31
Cfap53Q9D439 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfap53Q9D439 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.96■□□□□ 0.31
Cfap53Q9D439 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfap53Q9D439 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfap53Q9D439 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cfap53Q9D439 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap53Q9D439 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.94■□□□□ 0.3
Cfap53Q9D439 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.94■□□□□ 0.3
Cfap53Q9D439 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.94■□□□□ 0.3
Cfap53Q9D439 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.94■□□□□ 0.3
Cfap53Q9D439 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.94■□□□□ 0.3
Cfap53Q9D439 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap53Q9D439 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms