Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stag1Q9D3E6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Gm12008-201ENSMUST00000117791 755 ntBASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Gm13365-201ENSMUST00000121188 973 ntBASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Stag1Q9D3E6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.35■□□□□ 0.53
Stag1Q9D3E6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag1Q9D3E6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag1Q9D3E6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag1Q9D3E6 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.33■□□□□ 0.53
Stag1Q9D3E6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Stag1Q9D3E6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag1Q9D3E6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Auts2-212ENSMUST00000178555 309 ntBASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Gm20553-201ENSMUST00000204205 844 ntBASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Stag1Q9D3E6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Gm10499-201ENSMUST00000174094 934 ntBASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Gm10576-201ENSMUST00000191927 825 ntBASIC18.32■□□□□ 0.52
Stag1Q9D3E6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms