Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tlr3Q99MB1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Gm13418-201ENSMUST00000119097 944 ntBASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Gm1401-201ENSMUST00000122048 772 ntBASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.56■□□□□ 0.24
Tlr3Q99MB1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Gm27646-201ENSMUST00000183989 110 ntBASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tlr3Q99MB1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Grk6-207ENSMUST00000225925 2769 ntBASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Gm2213-201ENSMUST00000197485 688 ntBASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Gm10060-201ENSMUST00000212002 111 ntBASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms