Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19■□□□□ 0.63
RtcbQ99LF4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19■□□□□ 0.63
RtcbQ99LF4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RtcbQ99LF4 Gm38327-201ENSMUST00000195852 1755 ntBASIC19■□□□□ 0.63
RtcbQ99LF4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19■□□□□ 0.63
RtcbQ99LF4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RtcbQ99LF4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Gm25144-201ENSMUST00000179561 110 ntBASIC18.99■□□□□ 0.63
RtcbQ99LF4 Gm25352-201ENSMUST00000179815 110 ntBASIC18.99■□□□□ 0.63
RtcbQ99LF4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
RtcbQ99LF4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RtcbQ99LF4 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.99■□□□□ 0.63
RtcbQ99LF4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gm18049-201ENSMUST00000208909 581 ntBASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gm7730-201ENSMUST00000212486 454 ntBASIC18.98■□□□□ 0.63
RtcbQ99LF4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RtcbQ99LF4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.97■□□□□ 0.63
RtcbQ99LF4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gm15483-201ENSMUST00000120338 456 ntBASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gm29541-201ENSMUST00000191351 678 ntBASIC18.97■□□□□ 0.63
RtcbQ99LF4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RtcbQ99LF4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.96■□□□□ 0.63
RtcbQ99LF4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RtcbQ99LF4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms