Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm14722-201ENSMUST00000118943 689 ntBASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm37935-201ENSMUST00000192012 982 ntBASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga9Q91XX9 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga9Q91XX9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga9Q91XX9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga9Q91XX9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms