Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.65■□□□□ 0.42
Trex1Q91XB0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Gm43125-201ENSMUST00000201724 730 ntBASIC17.65■□□□□ 0.42
Trex1Q91XB0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trex1Q91XB0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trex1Q91XB0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trex1Q91XB0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trex1Q91XB0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.63■□□□□ 0.41
Trex1Q91XB0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trex1Q91XB0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 AA543401-201ENSMUST00000164248 1269 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.62■□□□□ 0.41
Trex1Q91XB0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trex1Q91XB0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.61■□□□□ 0.41
Trex1Q91XB0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trex1Q91XB0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.61■□□□□ 0.41
Trex1Q91XB0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms