Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Gm27867-201ENSMUST00000184778 125 ntBASIC12.97□□□□□ -0.33
H1fooQ8VIK3 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
H1fooQ8VIK3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Gm7367-201ENSMUST00000057611 492 ntBASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H1fooQ8VIK3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
H1fooQ8VIK3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Gm27357-201ENSMUST00000183754 135 ntBASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.95□□□□□ -0.34
H1fooQ8VIK3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms