Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gm15487-201ENSMUST00000122373 465 ntBASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Haglr-201ENSMUST00000100000 2085 ntBASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cspg4Q8VHY0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm16198-201ENSMUST00000118766 670 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm11543-201ENSMUST00000120758 370 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gm45331-201ENSMUST00000209868 554 ntBASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cspg4Q8VHY0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm8410-201ENSMUST00000117225 605 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms