Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.5■□□□□ 0.07
Vps39Q8R5L3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps39Q8R5L3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Gm19164-201ENSMUST00000210667 640 ntBASIC15.48■□□□□ 0.07
Vps39Q8R5L3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms