Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim29Q8R2Q0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim29Q8R2Q0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trim29Q8R2Q0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim29Q8R2Q0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim29Q8R2Q0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim29Q8R2Q0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Gm14722-201ENSMUST00000118943 689 ntBASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim29Q8R2Q0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms