Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.6□□□□□ -0.07
Clrn1Q8K445 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.6□□□□□ -0.07
Clrn1Q8K445 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm4535-201ENSMUST00000182274 558 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44357-201ENSMUST00000195897 142 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm19658-201ENSMUST00000196231 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44367-201ENSMUST00000196836 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44350-201ENSMUST00000197197 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44390-201ENSMUST00000197533 144 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44313-201ENSMUST00000198018 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44486-201ENSMUST00000198508 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44314-201ENSMUST00000199263 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44394-201ENSMUST00000199558 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44484-201ENSMUST00000199873 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44466-201ENSMUST00000200264 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm44359-201ENSMUST00000200671 138 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Gm10355-201ENSMUST00000097146 517 ntBASIC14.59□□□□□ -0.07
Clrn1Q8K445 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clrn1Q8K445 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clrn1Q8K445 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Clrn1Q8K445 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.57□□□□□ -0.08
Clrn1Q8K445 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clrn1Q8K445 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms