Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Gm18622-201ENSMUST00000219361 595 ntBASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cchcr1Q8K2I2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Gm7284-201ENSMUST00000131667 944 ntBASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cchcr1Q8K2I2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Gm4459-201ENSMUST00000118750 468 ntBASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Gm27867-201ENSMUST00000184778 125 ntBASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cchcr1Q8K2I2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cchcr1Q8K2I2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cchcr1Q8K2I2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cchcr1Q8K2I2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cchcr1Q8K2I2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms