Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.24■□□□□ 0.51
Nup88Q8CEC0 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Gm5867-201ENSMUST00000063197 592 ntBASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Nup88Q8CEC0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup88Q8CEC0 Sybu-209ENSMUST00000228639 4113 ntBASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Gm25745-201ENSMUST00000174945 133 ntBASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.21■□□□□ 0.51
Nup88Q8CEC0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 BC037039-201ENSMUST00000192003 2205 ntBASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nup88Q8CEC0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms