Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Gm12350-201ENSMUST00000121208 462 ntBASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Mir5126-201ENSMUST00000175513 77 ntBASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Gm15590-201ENSMUST00000078419 552 ntBASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc60Q8C4J0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Gm8318-201ENSMUST00000182954 872 ntBASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc60Q8C4J0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Gm13036-201ENSMUST00000117799 748 ntBASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc60Q8C4J0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms