Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.31■□□□□ 0.2
Trerf1Q8BXJ2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Birc2-201ENSMUST00000054878 378 ntBASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trerf1Q8BXJ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Trerf1Q8BXJ2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms