Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ckap4Q8BMK4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ckap4Q8BMK4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ckap4Q8BMK4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms