Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Gm10231-201ENSMUST00000181584 441 ntBASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Gm10175-202ENSMUST00000208752 441 ntBASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2bQ8BJF9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2bQ8BJF9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2bQ8BJF9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2bQ8BJF9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Chmp2bQ8BJF9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2bQ8BJF9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2bQ8BJF9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms