Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Gm25406-201ENSMUST00000157599 105 ntBASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc40Q8BI79 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gm14859-201ENSMUST00000117752 357 ntBASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gm27357-201ENSMUST00000183754 135 ntBASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gm7977-201ENSMUST00000193787 748 ntBASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gm44454-201ENSMUST00000198541 138 ntBASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc40Q8BI79 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Ccdc40Q8BI79 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.14■□□□□ 0.18
Ccdc40Q8BI79 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc40Q8BI79 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms