Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Samm50Q8BGH2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.12■□□□□ 0.49
Samm50Q8BGH2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Samm50Q8BGH2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Gm27459-201ENSMUST00000184860 107 ntBASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.11■□□□□ 0.49
Samm50Q8BGH2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.1■□□□□ 0.49
Samm50Q8BGH2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Samm50Q8BGH2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms