Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim50Q810I2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim50Q810I2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim50Q810I2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim50Q810I2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim50Q810I2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim50Q810I2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.06■□□□□ 0
Trim50Q810I2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.06■□□□□ 0
Trim50Q810I2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.06■□□□□ 0
Trim50Q810I2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim50Q810I2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim50Q810I2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Trim50Q810I2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim50Q810I2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Trim50Q810I2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trim50Q810I2 Gm11780-201ENSMUST00000136880 516 ntBASIC15.05■□□□□ -0
Trim50Q810I2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.05■□□□□ -0
Trim50Q810I2 Gm4535-201ENSMUST00000182274 558 ntBASIC15.05■□□□□ -0
Trim50Q810I2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trim50Q810I2 Gm10355-201ENSMUST00000097146 517 ntBASIC15.05■□□□□ -0
Trim50Q810I2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.05■□□□□ -0
Trim50Q810I2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim50Q810I2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trim50Q810I2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim50Q810I2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.04■□□□□ -0
Trim50Q810I2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.04■□□□□ -0
Trim50Q810I2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.04■□□□□ -0
Trim50Q810I2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.04■□□□□ -0
Trim50Q810I2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.04■□□□□ -0
Trim50Q810I2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Trim50Q810I2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim50Q810I2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms