Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Birc2-201ENSMUST00000054878 378 ntBASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm3Q80WV7 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Efs-202ENSMUST00000227037 2540 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Gm13884-201ENSMUST00000118103 829 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Gm18733-201ENSMUST00000173950 856 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Gm29707-201ENSMUST00000196325 491 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Srrm3Q80WV7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms