Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Gm43767-201ENSMUST00000198933 381 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm4459-201ENSMUST00000118750 468 ntBASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm27494-201ENSMUST00000184735 189 ntBASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm5312-201ENSMUST00000203728 547 ntBASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38bQ80SY5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.12■□□□□ 0.17
Prpf38bQ80SY5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms