Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.24□□□□□ -0.13
Pif1Q80SX8 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.24□□□□□ -0.13
Pif1Q80SX8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.24□□□□□ -0.13
Pif1Q80SX8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pif1Q80SX8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.23□□□□□ -0.13
Pif1Q80SX8 Gm17968-201ENSMUST00000194902 784 ntBASIC14.23□□□□□ -0.13
Pif1Q80SX8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.23□□□□□ -0.13
Pif1Q80SX8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pif1Q80SX8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.22□□□□□ -0.13
Pif1Q80SX8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pif1Q80SX8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.21□□□□□ -0.13
Pif1Q80SX8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms