Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.04■□□□□ -0
Ubfd1Q78JW9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.04■□□□□ -0
Ubfd1Q78JW9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.04■□□□□ -0
Ubfd1Q78JW9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Gm17271-201ENSMUST00000165535 355 ntBASIC15.04■□□□□ -0
Ubfd1Q78JW9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.04■□□□□ -0
Ubfd1Q78JW9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gm4995-201ENSMUST00000117247 432 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gm25911-201ENSMUST00000157621 56 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gm18246-201ENSMUST00000221023 728 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.03■□□□□ -0
Ubfd1Q78JW9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubfd1Q78JW9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.02■□□□□ -0
Ubfd1Q78JW9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.02■□□□□ -0
Ubfd1Q78JW9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubfd1Q78JW9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubfd1Q78JW9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Gm13597-201ENSMUST00000121239 375 ntBASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.01□□□□□ -0.01
Ubfd1Q78JW9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms