Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Mir7684-201ENSMUST00000183858 60 ntBASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Gm43438-201ENSMUST00000198133 379 ntBASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx55Q6ZPL9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gm15483-201ENSMUST00000120338 456 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gm6888-201ENSMUST00000221983 706 ntBASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx55Q6ZPL9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gm13015-201ENSMUST00000118674 204 ntBASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Ddx55Q6ZPL9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Ddx55Q6ZPL9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms