Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Asic1-205ENSMUST00000228185 1818 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Gm14722-201ENSMUST00000118943 689 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Rps4l-201ENSMUST00000071745 943 ntBASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc4Q6PAV2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc4Q6PAV2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Gm11452-201ENSMUST00000122376 690 ntBASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.05■□□□□ 0.32
Herc4Q6PAV2 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.05■□□□□ 0.32
Herc4Q6PAV2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms