Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcf1Q6P542 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Mir3081-201ENSMUST00000175305 84 ntBASIC17.33■□□□□ 0.36
Abcf1Q6P542 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcf1Q6P542 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.32■□□□□ 0.36
Abcf1Q6P542 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.32■□□□□ 0.36
Abcf1Q6P542 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.32■□□□□ 0.36
Abcf1Q6P542 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.32■□□□□ 0.36
Abcf1Q6P542 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcf1Q6P542 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm15794-201ENSMUST00000120182 631 ntBASIC17.31■□□□□ 0.36
Abcf1Q6P542 Olfr129-201ENSMUST00000122318 993 ntBASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm10052-201ENSMUST00000168019 960 ntBASIC17.31■□□□□ 0.36
Abcf1Q6P542 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm7729-201ENSMUST00000050143 801 ntBASIC17.31■□□□□ 0.36
Abcf1Q6P542 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.31■□□□□ 0.36
Abcf1Q6P542 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcf1Q6P542 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Gm18669-201ENSMUST00000216049 778 ntBASIC17.3■□□□□ 0.36
Abcf1Q6P542 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms