Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf6Q6NVF9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf6Q6NVF9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf6Q6NVF9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Gm7977-201ENSMUST00000193787 748 ntBASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf6Q6NVF9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15□□□□□ -0.01
Cpsf6Q6NVF9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Gm7506-201ENSMUST00000207758 815 ntBASIC15□□□□□ -0.01
Cpsf6Q6NVF9 AC117588.1-201ENSMUST00000228510 999 ntBASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf6Q6NVF9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm15372-201ENSMUST00000120729 834 ntBASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm12895-201ENSMUST00000122214 226 ntBASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf6Q6NVF9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms