Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Gm7488-201ENSMUST00000117148 684 ntBASIC18.11■□□□□ 0.49
Ltn1Q6A009 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ltn1Q6A009 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Gm14767-201ENSMUST00000121559 586 ntBASIC18.1■□□□□ 0.49
Ltn1Q6A009 Gm27533-201ENSMUST00000183800 152 ntBASIC18.1■□□□□ 0.49
Ltn1Q6A009 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.1■□□□□ 0.49
Ltn1Q6A009 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ltn1Q6A009 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm15487-201ENSMUST00000122373 465 ntBASIC18.09■□□□□ 0.49
Ltn1Q6A009 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm18049-201ENSMUST00000208909 581 ntBASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.09■□□□□ 0.49
Ltn1Q6A009 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.09■□□□□ 0.49
Ltn1Q6A009 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.09■□□□□ 0.49
Ltn1Q6A009 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ltn1Q6A009 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ltn1Q6A009 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
Ltn1Q6A009 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ltn1Q6A009 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Gm24694-201ENSMUST00000180054 110 ntBASIC18.08■□□□□ 0.48
Ltn1Q6A009 Gm27663-201ENSMUST00000184839 110 ntBASIC18.08■□□□□ 0.48
Ltn1Q6A009 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ltn1Q6A009 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Gm16215-201ENSMUST00000161990 637 ntBASIC18.07■□□□□ 0.48
Ltn1Q6A009 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.07■□□□□ 0.48
Ltn1Q6A009 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ltn1Q6A009 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms