Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.46□□□□□ -0.09
AtmQ62388 Gm18049-201ENSMUST00000208909 581 ntBASIC14.46□□□□□ -0.09
AtmQ62388 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.46□□□□□ -0.09
AtmQ62388 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
AtmQ62388 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.46□□□□□ -0.09
AtmQ62388 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.46□□□□□ -0.09
AtmQ62388 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AtmQ62388 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AtmQ62388 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.46□□□□□ -0.1
AtmQ62388 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.45□□□□□ -0.1
AtmQ62388 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
AtmQ62388 Gm11918-201ENSMUST00000121660 179 ntBASIC14.45□□□□□ -0.1
AtmQ62388 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.45□□□□□ -0.1
AtmQ62388 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.45□□□□□ -0.1
AtmQ62388 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
AtmQ62388 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.45□□□□□ -0.1
AtmQ62388 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AtmQ62388 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AtmQ62388 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.45□□□□□ -0.1
AtmQ62388 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.45□□□□□ -0.1
AtmQ62388 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AtmQ62388 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.45□□□□□ -0.1
AtmQ62388 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AtmQ62388 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AtmQ62388 Gm43703-201ENSMUST00000200523 763 ntBASIC14.45□□□□□ -0.1
AtmQ62388 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.44□□□□□ -0.1
AtmQ62388 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.44□□□□□ -0.1
AtmQ62388 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
AtmQ62388 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.44□□□□□ -0.1
AtmQ62388 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.44□□□□□ -0.1
AtmQ62388 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
AtmQ62388 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AtmQ62388 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.44□□□□□ -0.1
AtmQ62388 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.43□□□□□ -0.1
AtmQ62388 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 App-207ENSMUST00000227737 2827 ntBASIC14.43□□□□□ -0.1
AtmQ62388 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.43□□□□□ -0.1
AtmQ62388 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.43□□□□□ -0.1
AtmQ62388 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
AtmQ62388 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
AtmQ62388 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.43□□□□□ -0.1
AtmQ62388 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AtmQ62388 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms