Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Gm15794-201ENSMUST00000120182 631 ntBASIC12.95□□□□□ -0.34
SspnQ62147 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.95□□□□□ -0.34
SspnQ62147 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SspnQ62147 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SspnQ62147 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SspnQ62147 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SspnQ62147 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.94□□□□□ -0.34
SspnQ62147 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SspnQ62147 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
SspnQ62147 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SspnQ62147 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SspnQ62147 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SspnQ62147 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.93□□□□□ -0.34
SspnQ62147 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.93□□□□□ -0.34
SspnQ62147 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SspnQ62147 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SspnQ62147 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SspnQ62147 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SspnQ62147 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SspnQ62147 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SspnQ62147 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SspnQ62147 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.92□□□□□ -0.34
SspnQ62147 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms