Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Phox2aQ62066 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.83□□□□□ -0.36
Phox2aQ62066 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Phox2aQ62066 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Phox2aQ62066 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Phox2aQ62066 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Phox2aQ62066 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.82□□□□□ -0.36
Phox2aQ62066 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.82□□□□□ -0.36
Phox2aQ62066 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Gm27011-201ENSMUST00000182352 972 ntBASIC12.82□□□□□ -0.36
Phox2aQ62066 Gm10517-202ENSMUST00000192970 758 ntBASIC12.82□□□□□ -0.36
Phox2aQ62066 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Phox2aQ62066 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Phox2aQ62066 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.81□□□□□ -0.36
Phox2aQ62066 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Phox2aQ62066 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Phox2aQ62066 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.81□□□□□ -0.36
Phox2aQ62066 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.81□□□□□ -0.36
Phox2aQ62066 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Phox2aQ62066 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.81□□□□□ -0.36
Phox2aQ62066 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Phox2aQ62066 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Phox2aQ62066 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.8□□□□□ -0.36
Phox2aQ62066 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.8□□□□□ -0.36
Phox2aQ62066 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.8□□□□□ -0.36
Phox2aQ62066 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.8□□□□□ -0.36
Phox2aQ62066 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.8□□□□□ -0.36
Phox2aQ62066 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.8□□□□□ -0.36
Phox2aQ62066 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.8□□□□□ -0.36
Phox2aQ62066 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Phox2aQ62066 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.8□□□□□ -0.36
Phox2aQ62066 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms