Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ptch1Q61115 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC22.03■■□□□ 1.12
Ptch1Q61115 Gm15593-201ENSMUST00000122085 1008 ntBASIC22.03■■□□□ 1.12
Ptch1Q61115 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC22.03■■□□□ 1.12
Ptch1Q61115 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptch1Q61115 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
Ptch1Q61115 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ptch1Q61115 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ptch1Q61115 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Gm9522-201ENSMUST00000182394 926 ntBASIC22.02■■□□□ 1.12
Ptch1Q61115 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC22.02■■□□□ 1.12
Ptch1Q61115 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptch1Q61115 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ptch1Q61115 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ptch1Q61115 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ptch1Q61115 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Gm37917-201ENSMUST00000194711 392 ntBASIC22.01■■□□□ 1.11
Ptch1Q61115 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ptch1Q61115 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC22.01■■□□□ 1.11
Ptch1Q61115 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptch1Q61115 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC22■■□□□ 1.11
Ptch1Q61115 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC22■■□□□ 1.11
Ptch1Q61115 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 Gm6598-201ENSMUST00000202719 2615 ntBASIC22■■□□□ 1.11
Ptch1Q61115 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ptch1Q61115 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC22■■□□□ 1.11
Ptch1Q61115 Gm17150-201ENSMUST00000165577 381 ntBASIC22■■□□□ 1.11
Ptch1Q61115 Gm16476-201ENSMUST00000221544 139 ntBASIC22■■□□□ 1.11
Ptch1Q61115 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptch1Q61115 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC21.99■■□□□ 1.11
Ptch1Q61115 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Gm3436-201ENSMUST00000179930 840 ntBASIC21.99■■□□□ 1.11
Ptch1Q61115 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC21.99■■□□□ 1.11
Ptch1Q61115 Gm18624-201ENSMUST00000220966 658 ntBASIC21.99■■□□□ 1.11
Ptch1Q61115 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ptch1Q61115 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ptch1Q61115 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 AC164565.1-201ENSMUST00000217520 1484 ntBASIC21.98■■□□□ 1.11
Ptch1Q61115 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
Ptch1Q61115 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptch1Q61115 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Gm38319-201ENSMUST00000194537 1266 ntBASIC21.97■■□□□ 1.11
Ptch1Q61115 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC21.97■■□□□ 1.11
Ptch1Q61115 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC21.97■■□□□ 1.11
Ptch1Q61115 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Gm6756-201ENSMUST00000180647 1620 ntBASIC21.97■■□□□ 1.11
Ptch1Q61115 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ptch1Q61115 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms