Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scaf1Q5U4C3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.07■□□□□ 0.8
Scaf1Q5U4C3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf1Q5U4C3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.05■□□□□ 0.8
Scaf1Q5U4C3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gm25144-201ENSMUST00000179561 110 ntBASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gm25352-201ENSMUST00000179815 110 ntBASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gm43767-201ENSMUST00000198933 381 ntBASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf1Q5U4C3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Gm20949-201ENSMUST00000206478 952 ntBASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms