Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Gm13597-201ENSMUST00000121239 375 ntBASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps54Q5SPW0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Vps54Q5SPW0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps54Q5SPW0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps54Q5SPW0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.52■□□□□ 0.55
Vps54Q5SPW0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Gm9727-201ENSMUST00000161387 555 ntBASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps54Q5SPW0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vps54Q5SPW0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps54Q5SPW0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms