Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Gm12895-201ENSMUST00000122214 226 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Gm7506-201ENSMUST00000207758 815 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Gm7367-201ENSMUST00000057611 492 ntBASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5d-4Q5R1F6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5d-4Q5R1F6 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm4459-201ENSMUST00000118750 468 ntBASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm15372-201ENSMUST00000120729 834 ntBASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms