Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim58Q5NCC9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim58Q5NCC9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim58Q5NCC9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Gm27646-201ENSMUST00000183989 110 ntBASIC19.55■□□□□ 0.72
Trim58Q5NCC9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.55■□□□□ 0.72
Trim58Q5NCC9 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim58Q5NCC9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trim58Q5NCC9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.53■□□□□ 0.72
Trim58Q5NCC9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Gm8318-201ENSMUST00000182954 872 ntBASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Gm6296-201ENSMUST00000222599 943 ntBASIC19.52■□□□□ 0.72
Trim58Q5NCC9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim58Q5NCC9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim58Q5NCC9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Trim58Q5NCC9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms