Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
Prune2Q52KR3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prune2Q52KR3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.3□□□□□ -0.12
Prune2Q52KR3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prune2Q52KR3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.29□□□□□ -0.12
Prune2Q52KR3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.29□□□□□ -0.12
Prune2Q52KR3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.28□□□□□ -0.12
Prune2Q52KR3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.28□□□□□ -0.12
Prune2Q52KR3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms