Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lsmem1Q3UQS2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lsmem1Q3UQS2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lsmem1Q3UQS2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lsmem1Q3UQS2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsmem1Q3UQS2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.63■□□□□ 0.09
Lsmem1Q3UQS2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.62■□□□□ 0.09
Lsmem1Q3UQS2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gm10499-201ENSMUST00000174094 934 ntBASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsmem1Q3UQS2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms